| Scientific Name | Notes | Rarity Ranks | Common Name |
|---|---|---|---|
| Acmispon junceus var. junceus | CNPS-EB: A1 | ||
| Allium crispum | CNPS-EB: A1 | crinkled onion | |
| Amaranthus palmeri | CNPS-EB: A1x | Palmer's amaranth | |
| Amsinckia grandiflora | CNPS-EB: *A1 State CNPS: 1B.1 FESA Status: FE CESA Status: CE | large-flowered fiddleneck | |
| Amsinckia tessellata var. gloriosa | CNPS-EB: A1 | carrizo fiddleneck, tessellate fiddleneck | |
| Amsinckia vernicosa | CNPS-EB: A1 | waxy fiddleneck, forked fiddleneck | |
| Argemone munita | CNPS-EB: A1 | chicalote, prickly poppy | |
| Athysanus unilateralis | (formerly Heterodraba unilateralis) | CNPS-EB: A1 | heterodraba |
| Atriplex serenana var. serenana | CNPS-EB: A1 | bractscale | |
| Berberis nervosa | (B. pinnata is more common) | CNPS-EB: A1 | Oregon grape |
| Bromus sitchensis var. maritimus | (formerly B. maritimus) | CNPS-EB: A1 | maritime brome, seaside brome grass |
| Calochortus clavatus var. pallidus | CNPS-EB: A1 | club-haired mariposa-lily | |
| Camissoniopsis cheiranthifolia subsp. cheiranthifolia | CNPS-EB: A1 | dune suncup | |
| Carex aquatilis var. dives | CNPS-EB: A1 | Sitka sedge | |
| Carex gracilior | CNPS-EB: A1 | slender sedge | |
| Carex laeviculmis | CNPS-EB: A1 | smooth-stemmed sedge | |
| Carex leporina | (formerly Carex ovalis) | CNPS-EB: A1 | hare sedge, oval sedge, mountain hare sedge |
| Carex multicostata | CNPS-EB: A1 | many-ribbed sedge | |
| Carex senta | CNPS-EB: A1 | western rough sedge, rough sedge | |
| Carex unilateralis | CNPS-EB: A1 | one-sided sedge | |
| Castilleja exserta subsp. latifolia | CNPS-EB: A1 | owl's-clover | |
| Chaenactis glabriuscula var. glabriuscula | CNPS-EB: A1 | yellow pincushion | |
| Chaenactis glabriuscula var. megacephala | CNPS-EB: A1 | yellow pincushion | |
| Chenopodium berlandieri var. sinuatum | CNPS-EB: A1 | ||
| Chenopodium berlandieri var. unknown | Split into 2 varieties. Sites need to be surveyed to determine vars.. | CNPS-EB: A2? | pitseed goosefoot |
| Chlorogalum pomeridianum var. minus | CNPS-EB: *A1 State CNPS: 1B.2 | dwarf soaproot | |
| Chloropyron molle subsp. hispidum | CNPS-EB: *A1 State CNPS: 1B.1 | hispid salty bird's-beak, hispid bird's-beak | |
| Chloropyron palmatum | CNPS-EB: *A1 State CNPS: 1B.1 FESA Status: FE CESA Status: CE | palmate salty bird's-beak, palmate-bracted bird's-beak | |
| Cicuta maculata var. bolanderi | CNPS-EB: *A1 State CNPS: 2B.1 | Bolander's water-hemlock, water hemlock | |
| Cirsium andrewsii | CNPS-EB: *A1 State CNPS: 1B.2 | Franciscan thistle | |
| Cirsium remotifolium var. odontolepis | CNPS-EB: A1 | remote-leaved thistle | |
| Clarkia breweri | CNPS-EB: *A1 State CNPS: 4.2 | Brewer's clarkia | |
| Clarkia epilobioides | CNPS-EB: A1 | ||
| Clarkia purpurea subsp. viminea | (ssp. quadrivulnera more common | CNPS-EB: A1 | large godetia |
| Collomia diversifolia | CNPS-EB: *A1 State CNPS: 4.3 | serpentine collomia | |
| Cuscuta indecora var. indecora | CNPS-EB: A1x | large-seeded dodder, pretty dodder | |
| Cyperus odoratus | CNPS-EB: A1 | coarse cyperus | |
| Cyperus strigosus | CNPS-EB: A1 | false nutsedge, straw-colored cyperus | |
| Delphinium gypsophilum | CNPS-EB: A1 | gypsum-loving larkspur | |
| Diplacus bolanderi | (formerly Mimulus b.) | CNPS-EB: A1 | Bolander's monkeyflower |
| Downingia concolor var. concolor | CNPS-EB: A1 | ||
| Draba cuneifolia | CNPS-EB: A1 | Sonora draba | |
| Dudleya cymosa subsp. cymosa | (ssp. paniculata is more common) | CNPS-EB: A1 | spreading dudleya |
| Elatine brachysperma | CNPS-EB: A1 | waterwort | |
| Elymus stebbinsii | CNPS-EB: A1 | Stebbins' wheat grass, Parish's wheat-grass | |
| Epipactis gigantea | CNPS-EB: A1 | stream orchid | |
| Eragrostis mexicana subsp. virescens | CNPS-EB: A1 | Orcutt's eragrostis | |
| Eremalche exilis | CNPS-EB: A1 | white mallow | |
| Eriastrum pluriflorum subsp. pluriflorum | CNPS-EB: A1 | many-flowered eriastrum | |
| Erigeron reductus var. angustatus | CNPS-EB: A1 | California rayless daisy | |
| Erythranthe inconspicua | CNPS-EB: *A1 State CNPS: 4.3 | ||
| Euonymus occidentalis var. occidentalis | CNPS-EB: A1 | burning bush | |
| Fremontodendron californicum | CNPS-EB: A1 | flannelbush | |
| Fritillaria falcata | CNPS-EB: *A1 State CNPS: 1B.2 | talus fritillary | |
| Galium porrigens var. tenue | (var. porrigens is more common | CNPS-EB: A1 | climbing bedstraw |
| Gaultheria shallon | CNPS-EB: A1 | salal | |
| Gilia tricolor subsp. unknown | CNPS-EB: B? | birds-eye gilia | |
| Glyceria leptostachya | CNPS-EB: A1 | narrow manna grass, Davy's mannagrass | |
| Hesperevax acaulis var. ambusticola | (H. sparsiflora is more common | CNPS-EB: A1 | fire evax |
| Hesperocyparis sargentii | (formerly Cupressus s.) | CNPS-EB: A1 | Sargent cypress |
| Horkelia californica var. californica | CNPS-EB: A1 | California horkelia | |
| Hosackia stipularis var. stipularis | CNPS-EB: A1 | stipulate lotus | |
| Idahoa scapigera | CNPS-EB: A1 | flat-pod | |
| Lasthenia ferrisiae | CNPS-EB: *A1 State CNPS: 4.2 | Ferris' goldfields | |
| Lasthenia fremontii | CNPS-EB: A1 | Fremont's goldfields | |
| Lasthenia minor | CNPS-EB: A1 | coastal goldfields, woolly goldfields | |
| Lasthenia platycarpha | CNPS-EB: A1 | alkali goldfields | |
| Legenere limosa | CNPS-EB: *A1 State CNPS: 1B.1 | legenere | |
| Leptosiphon grandiflorus | (formerly Linanthus g.) | CNPS-EB: *A1 State CNPS: 4.2 | large-flowered leptosiphon, large-flowered linanthus |
| Leptosiphon liniflorus | (formerly Linanthus l.) | CNPS-EB: A1 | flax-flowered linanthus, flax-flowered leptosiphon |
| Leptosyne calliopsidea | (formerly Coreopsis c.) | CNPS-EB: A1 | leafy-stemmed coreopsis |
| Leptosyne hamiltonii | (formerly Coreopsis h.) | CNPS-EB: *A1 State CNPS: 1B.2 | Mount Hamilton coreopsis |
| Lithophragma cymbalaria | CNPS-EB: A1 | mission star | |
| Lupinus affinis | CNPS-EB: A1 | lupine | |
| Lycopus asper | CNPS-EB: A1 | bugleweed | |
| Lysimachia minima | (formerly Anagallis minima, Centunculus minimus) | CNPS-EB: A1 | chaffweed |
| Malacothrix coulteri | CNPS-EB: A1 | snake's-head | |
| Melica bulbosa | CNPS-EB: A1 | onion grass | |
| Microseris elegans | CNPS-EB: A1 | elegant microseris | |
| Mirabilis laevis var. crassifolia | (formerly M. californica) | CNPS-EB: A1 | wishbone bush, California four o'clock |
| Monolopia lanceolata | CNPS-EB: A1 | common hillside daisy, common monolopia | |
| Myosotis laxa | CNPS-EB: A1x | Bay forget-me-not | |
| Nemacladus capillaris | CNPS-EB: A1 | ||
| Nicotiana attenuata | CNPS-EB: A1 | coyote tobacco | |
| Oxalis smalliana | Formerly Oxalis oregana. SF Bay plants now O. smalliana | CNPS-EB: A1 | redwood sorrel |
| Parietaria hespera var. californica | CNPS-EB: A1 | California pellitory | |
| Petasites frigidus var. palmatus | CNPS-EB: A1 | western sweet coltsfoot, coltsfoot | |
| Phacelia douglasii | CNPS-EB: A1 | Douglas' phacelia | |
| Phalaris lemmonii | CNPS-EB: A1 | Lemmon's canary-grass | |
| Phyla lanceolata | CNPS-EB: A1 | fog-fruit | |
| Plagiobothrys glaber | CNPS-EB: *A1 State CNPS: 1A | hairless popcornflower | |
| Plantago maritima | CNPS-EB: A1 | Pacific seaside plantain | |
| Polystichum californicum | CNPS-EB: A1 | California sword fern | |
| Psilocarphus chilensis | (formerly P. tenellus var. glo | CNPS-EB: A1 | round woolly marbles, round woolly-marbles |
| Ribes speciosum | CNPS-EB: A1 | fuchsia-flowered gooseberry | |
| Romanzoffia californica | CNPS-EB: A1x | Suksdorf's romanzoffia | |
| Sabulina californica | (formerly Minuartia californica) | CNPS-EB: A1 | California sandwort |
| Salvia spathacea | CNPS-EB: A1 | California hummingbird sage, hummingbird sage | |
| Silene lemmonii | CNPS-EB: A1 | Lemmon's catchfly | |
| Sparganium eurycarpum var. greenei | CNPS-EB: A1 | Greene's bur-reed | |
| Spiranthes porrifolia | CNPS-EB: A1 | western ladies' tresses | |
| Spiranthes romanzoffiana | CNPS-EB: A1 | hooded ladies' tresses | |
| Sporobolus airoides | CNPS-EB: A1 | alkali sacaton | |
| Taxus brevifolia | CNPS-EB: A1 | Pacific yew | |
| Verbena hastata | CNPS-EB: A1 | blue vervain | |
| Viola adunca subsp. adunca | CNPS-EB: A1 | western blue violet | |
| Viola purpurea subsp. purpurea | CNPS-EB: A1 | mountain violet | |
| Wolffia brasiliensis | CNPS-EB: *A1 State CNPS: 2B.3 | Brazilian watermeal |