| Scientific Name | Notes | Rarity Ranks | Common Name |
|---|---|---|---|
| Allenrolfea occidentalis | CNPS-EB: C | iodine bush | |
| Alopecurus saccatus | CNPS-EB: B | Howell's meadow foxtail | |
| Amaranthus blitoides | CNPS-EB: C | procumbent pigweed, prostrate amaranth | |
| Amaranthus californicus | CNPS-EB: B | Californian amaranth | |
| Anemopsis californica | CNPS-EB: B | yerba mansa, lizard tail | |
| Aphyllon vallicola | CNPS-EB: B | California broom-rape | |
| Arthrocnemum subterminale | CNPS-EB: A2 | Parish's glasswort | |
| Astragalus asymmetricus | CNPS-EB: C | San Joaquin locoweeed | |
| Astragalus tener var. tener | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G2T1 CNDDB Rank: S1 | alkali milkvetch | |
| Atriplex argentea var. expansa | CNPS-EB: B | silverscale | |
| Atriplex coronata var. coronata | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G4T3 CNDDB Rank: S3 | crownscale | |
| Atriplex depressa | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | brittlescale | |
| Atriplex fruticulosa | CNPS-EB: B | ballscale, little oak orach, ball saltbush | |
| Atriplex minuscula | CNPS-EB: *A2 State CNPS: 1B.1 Global Rank: G2 CNDDB Rank: S2 | LESSER SALTSCALE | |
| Balsamorhiza macrolepis | CNPS-EB: *A1 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | big-scale balsamroot | |
| Blennosperma nanum var. nanum | CNPS-EB: C | blennosperma | |
| Blepharizonia plumosa | CNPS-EB: *A2 State CNPS: 1B.1 Global Rank: G1G2 CNDDB Rank: S1S2 | big tarplant | |
| Bolboschoenus maritimus subsp. paludosus | (formerly Scirpus m.) | CNPS-EB: C | bulrush |
| Brickellia californica | CNPS-EB: C | California brickellbush, California brickellia | |
| Brodiaea terrestris subsp. terrestris | CNPS-EB: B | dwarf brodiaea | |
| Carex nudata | CNPS-EB: B | torrent sedge | |
| Centromadia parryi subsp. congdonii | (formerly Hemizonia p. ssp. c. | CNPS-EB: *A2 State CNPS: 1B.1 Global Rank: G3T2 CNDDB Rank: S2 | Congdon's tarplant |
| Chloropyron molle subsp. hispidum | CNPS-EB: *A1 State CNPS: 1B.1 Global Rank: G2T1 CNDDB Rank: S1 | hispid salty bird's-beak, hispid bird's-beak | |
| Chloropyron palmatum | CNPS-EB: *A1 State CNPS: 1B.1 Global Rank: G1 CNDDB Rank: S1 FESA Status: FE CESA Status: CE | palmate salty bird's-beak, palmate-bracted bird's-beak | |
| Crassula aquatica | CNPS-EB: B | water pygmy-weed | |
| Datisca glomerata | CNPS-EB: C | durango root | |
| Deinandra bacigalupii | (formerly Hemizonia increscens | CNPS-EB: *A1 State CNPS: 1B.1 Global Rank: G1 CNDDB Rank: S1 CESA Status: CE | Livermore tarplant |
| Deinandra lobbii | (formerly Hemizonia l.) | CNPS-EB: C | three-rayed tarweed |
| Deschampsia cespitosa subsp. cespitosa | CNPS-EB: C | tufted hairgrass | |
| Deschampsia danthonioides | CNPS-EB: C | annual hair grass | |
| Downingia cuspidata | CNPS-EB: A1 | cuspidate downingia | |
| Downingia pulchella | CNPS-EB: B | flat-faced downingia | |
| Echinodorus berteroi | CNPS-EB: A2 | burhead | |
| Elatine californica | CNPS-EB: A2 | waterwort | |
| Elymus multisetus | CNPS-EB: C | big squirreltail | |
| Epilobium campestre | CNPS-EB: B | smooth boisduvalia | |
| Ericameria arborescens | CNPS-EB: B | golden-fleece | |
| Eriogonum gracile var. gracile | CNPS-EB: C | slender woolly wild buckwheat, slender buckwheat | |
| Eriogonum roseum | CNPS-EB: A2 | wand wild buckwheat, virgate buckwheat | |
| Eriogonum wrightii var. trachygonum | CNPS-EB: C | rough-node bastard-sage, Wright's eriogonum | |
| Erythranthe latidens | (formerly Mimulus latidens) | CNPS-EB: A1 | broad-toothed monkeyflower |
| Euphorbia serpillifolia subsp. serpillifolia | CNPS-EB: C | thyme-leaved spurge | |
| Extriplex joaquinana | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | San Joaquin spearscale, San Joaquin saltbush | |
| Frangula californica subsp. tomentella | (formerly Rhamnus t.) | CNPS-EB: C | hoary coffeeberry |
| Fritillaria agrestis | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G3 CNDDB Rank: S3 | stinkbells | |
| Helianthus californicus | CNPS-EB: C | California sunflower | |
| Hemizonia congesta subsp. lutescens | CNPS-EB: B | hayfield tarweed | |
| Heterotheca oregona var. scaberrima | CNPS-EB: A1 | Oregon goldenaster | |
| Hoita macrostachya | CNPS-EB: B | California hemp | |
| Hordeum depressum | CNPS-EB: B | low barley, alkali barley | |
| Juncus phaeocephalus var. unknown | CNPS-EB: A2? | brown-headed rush | |
| Lastarriaea coriacea | CNPS-EB: A2 | leather-spineflower, lastarriaea | |
| Lasthenia ferrisiae | CNPS-EB: *A1 State CNPS: 4.2 Global Rank: G3 CNDDB Rank: S3 | Ferris' goldfields | |
| Lasthenia fremontii | CNPS-EB: A1 | Fremont's goldfields | |
| Lasthenia glaberrima | CNPS-EB: B | smooth goldfields | |
| Lasthenia glabrata subsp. glabrata | CNPS-EB: A2 | yellow-ray goldfields | |
| Layia platyglossa | CNPS-EB: B | tidy-tips | |
| Lepidium acutidens | CNPS-EB: C | sharp-toothed pepper-grass | |
| Lepidium dictyotum | CNPS-EB: B | alkali pepper-grass | |
| Lepidium latipes | CNPS-EB: B | dwarf peppergrass | |
| Lepidium oxycarpum | CNPS-EB: A2 | sharp-podded pepper-grass | |
| Leptochloa fusca subsp. uninervia | CNPS-EB: A1 | mexican sprangletop, dense-flowered sprangle-top | |
| Leptosiphon liniflorus | (formerly Linanthus l.) | CNPS-EB: A1 | flax-flowered linanthus, flax-flowered leptosiphon |
| Lessingia nemaclada | CNPS-EB: A2 | slender-stemmed lessignia | |
| Lomatium caruifolium var. caruifolium | CNPS-EB: B | caraway-leaved lomatium | |
| Mentha canadensis | CNPS-EB: B | American cornmint, Japanese peppermint | |
| Microseris campestris | CNPS-EB: A1 | San Joaquin microseris | |
| Mimetanthe pilosa | (formerly Mimulus pilosus) | CNPS-EB: B | downy monkeyflower |
| Muilla maritima | CNPS-EB: B | common muilla | |
| Myosurus minimus subsp. apus | CNPS-EB: *A1 State CNPS: 3.1 Global Rank: G5T2Q CNDDB Rank: S2 | little mousetail | |
| Myosurus minimus subsp. minimus | CNPS-EB: C | common mouse-tail | |
| Myosurus sessilis | CNPS-EB: A1 | sessile mouse-tail | |
| Navarretia cotulifolia | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G4 CNDDB Rank: S4 | cotula navarretia | |
| Navarretia prostrata | CNPS-EB: *A1 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | prostrate vernal pool navarretia | |
| Nicotiana attenuata | CNPS-EB: A1 | coyote tobacco | |
| Nicotiana quadrivalvis | CNPS-EB: B | indian tobacco | |
| Nitrophila occidentalis | CNPS-EB: A1 | nitrophila | |
| Panicum capillare | CNPS-EB: A2 | witch grass | |
| Persicaria hydropiperoides | (formerly Polygonum h.) | CNPS-EB: A2 | false waterpepper, water-pepper |
| Persicaria lapathifolia | (formerly Polygonum lapathifol | CNPS-EB: B | willow weed |
| Persicaria punctata | (formerly Polygonum punctatum) | CNPS-EB: C | water smartweed |
| Phacelia ciliata | CNPS-EB: B | Great Valley phacelia, Great Valley phacelia | |
| Pilularia americana | CNPS-EB: A1 | pillwort | |
| Plagiobothrys acanthocarpus | CNPS-EB: B | adobe popcornflower, adobe allocarya | |
| Plagiobothrys canescens var. canescens | CNPS-EB: C | valley popcornflower | |
| Plagiobothrys humistratus | CNPS-EB: A2 | low popcornflower, dwarf allocarya | |
| Plagiobothrys leptocladus | CNPS-EB: A1 | alkali plagiobothrys | |
| Plagiobothrys stipitatus var. stipitatus | (var. micranthus is more commo | CNPS-EB: C | showy great valley popcornflower, stipitate allocarya |
| Plagiobothrys undulatus | CNPS-EB: A2 | wavy-stemmed popcornflower, coast allocarya | |
| Plantago elongata | CNPS-EB: B | annual coast plantain | |
| Pleuropogon californicus var. californicus | CNPS-EB: B | semaphore grass | |
| Populus trichocarpa | (formerly P. balsamifera var. | CNPS-EB: C | black cottonwood |
| Prunus emarginata | CNPS-EB: C | bitter cherry | |
| Pseudognaphalium beneolens | (formerly Gnaphalium canescens | CNPS-EB: C | fragrant everlasting |
| Psilocarphus brevissimus var. brevissimus | CNPS-EB: B | dwarf woollyheads, dwarf woolly-marbles | |
| Puccinellia simplex | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | little alkali grass | |
| Quercus lobata | CNPS-EB: B | valley oak, roble | |
| Rumex californicus | (formerly R. salicifolius var. dentatus) | CNPS-EB: C | willow dock |
| Sagina decumbens subsp. occidentalis | (S. apetala is more common) | CNPS-EB: B | western pearlwort |
| Sesuvium verrucosum | CNPS-EB: B | western sea-purslane, sea-purslane | |
| Spergularia macrotheca var. longistyla | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G5T2 CNDDB Rank: S2 | large-flowered sand spurry | |
| Sporobolus airoides | CNPS-EB: A1 | alkali sacaton | |
| Stachys albens | CNPS-EB: B | white hedge nettle | |
| Stipa lepida | CNPS-EB: C | foothill needlegrass | |
| Stipa pulchra | CNPS-EB: C | purple needlegrass | |
| Suaeda nigra | (formerly S. moquinii) | CNPS-EB: B | bush seepweed |
| Trifolium barbigerum | CNPS-EB: A2 | bearded clover | |
| Trifolium depauperatum var. depauperatum | (vars. amplectens and truncatu | CNPS-EB: B | dwarf sack clover |
| Trifolium fucatum | CNPS-EB: C | bull clover | |
| Trifolium grayi | CNPS-EB: A1 | Gray's clover | |
| Trifolium hydrophilum | (vars. amplectens and truncatu | CNPS-EB: *A2 State CNPS: 1B.2 Global Rank: G2 CNDDB Rank: S2 | saline clover |
| Trifolium lilacinum | (Included within T. barbigerum | CNPS-EB: A1 | Gray's clover |
| Triglochin scilloides | CNPS-EB: C | flowering-quillwort | |
| Wyethia glabra | (W. helenioides is more common | CNPS-EB: C | mule ears |
| Alisma triviale | (formerly A. plantago-aquatica | CNPS-EB: C | water plantain |
| Amsinckia eastwoodiae | CNPS-EB: A2 | Eastwood's fiddleneck | |
| Amsinckia lycopsoides | CNPS-EB: C | bugloss-flowered fiddleneck, bugloss fiddleneck | |
| Athysanus unilateralis | (formerly Heterodraba unilateralis) | CNPS-EB: A1 | heterodraba |
| Blepharizonia laxa | (formerly B. plumosa ssp. visc | CNPS-EB: B | big tarplant |
| Bolboschoenus fluviatilis | (formerly Scirpus f.) | CNPS-EB: A1x | river bulrush |
| Carex senta | CNPS-EB: A1 | western rough sedge, rough sedge | |
| Caulanthus flavescens | CNPS-EB: A2 | yellow-flowered thelypodium | |
| Cirsium cymosum var. cymosum | CNPS-EB: C | peregrine thistle | |
| Clarkia gracilis subsp. gracilis | CNPS-EB: C | summer's darling | |
| Cucurbita foetidissima | CNPS-EB: A1 | buffalo gourd, calabazilla, calabazilla | |
| Cuscuta californica var. californica | CNPS-EB: A2 | California dodder | |
| Cuscuta indecora var. indecora | CNPS-EB: A1x | large-seeded dodder, pretty dodder | |
| Deinandra kelloggii | (formerly Hemizonia k.) | CNPS-EB: A2 | Kellogg's tarweed |
| Downingia bella | CNPS-EB: A1x | Hoover's downingia | |
| Downingia insignis | CNPS-EB: A1 | cupped downingia | |
| Elymus stebbinsii | CNPS-EB: A1x | Stebbins' wheat grass, Parish's wheat-grass | |
| Equisetum laevigatum | CNPS-EB: A2 | smooth scouring rush | |
| Eriogonum angulosum | CNPS-EB: B | angle-stem wild buckwheat, angle-stemmed eriogonum | |
| Eriogonum luteolum var. luteolum | CNPS-EB: A2 | golden-carpet wild buckwheat, golden carpet | |
| Eryngium vaseyi var. vallicola | CNPS-EB: A1 | coyote-thistle, Vasey's coyote-thistle | |
| Erythranthe microphylla | CNPS-EB: A1x | ||
| Eschscholzia caespitosa | CNPS-EB: A1 | tufted poppy | |
| Euphorbia ocellata subsp. ocellata | CNPS-EB: B | valley spurge | |
| Fraxinus latifolia | CNPS-EB: B | Oregon ash | |
| Gilia achilleifolia subsp. unknown | CNPS-EB: C? | California gilia | |
| Gilia tricolor subsp. unknown | CNPS-EB: B? | birds-eye gilia | |
| Glycyrrhiza lepidota | CNPS-EB: C | wild licorice | |
| Gutierrezia californica | CNPS-EB: C | California matchweed | |
| Hesperevax caulescens | (H. sparsiflora is more common | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G3 CNDDB Rank: S3 | hogwallow starfish |
| Holocarpha obconica | CNPS-EB: B | San Joaquin tarplant | |
| Isolepis cernua | (formerly Scirpus cernuus) | CNPS-EB: C | low club-rush |
| Juncus articulatus subsp. articulatus | CNPS-EB: A1x | jointed rush | |
| Keckiella breviflora var. breviflora | CNPS-EB: A2 | gaping penstemon | |
| Koeleria macrantha | CNPS-EB: C | june grass | |
| Lasthenia minor | CNPS-EB: A1 | coastal goldfields, woolly goldfields | |
| Layia chrysanthemoides | CNPS-EB: A2 | smooth layia | |
| Leptochloa fusca subsp. fascicularis | CNPS-EB: A1 | bearded sprangletop | |
| Leptosiphon aureus | (formerly L.acicularis, Linanthus acicularis) | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G4? CNDDB Rank: S4? | bristly leptosiphon, bristly linanthus |
| Leptosiphon grandiflorus | (formerly Linanthus g.) | CNPS-EB: *A1x State CNPS: 4.2 Global Rank: G3G4 CNDDB Rank: S3S4 | large-flowered leptosiphon, large-flowered linanthus |
| Lupinus affinis | CNPS-EB: A1 | lupine | |
| Lupinus concinnus | CNPS-EB: A1 | Bajada lupine | |
| Marah oregana | CNPS-EB: C | coast man-root | |
| Matricaria occidentalis | (formerly Chamomilla o.) (hist | CNPS-EB: A1x | valley mayweed, valley pineapple weed |
| Melica californica | CNPS-EB: C | California melic | |
| Mentzelia laevicaulis var. laevicaulis | (historical-1969) | CNPS-EB: A1x | blazing star |
| Microseris acuminata | CNPS-EB: A1 | Sierra Foothills microseris | |
| Monolopia major | CNPS-EB: B | cupped monolopia | |
| Montia fontana | CNPS-EB: C | water chickweed, blinks, water chickweed | |
| Penstemon heterophyllus var. purdyi | CNPS-EB: A2 | foothill penstemon | |
| Phoradendron leucarpum subsp. macrophyllum | (formerly P. serotinum subsp. macrophyllum, P. macrophyllum) | CNPS-EB: C | big leaf mistletoe |
| Piperia michaelii | CNPS-EB: *A2 State CNPS: 4.2 Global Rank: G3 CNDDB Rank: S3 | Michael's rein-orchid | |
| Plagiobothrys glaber | CNPS-EB: *A1 State CNPS: 1A Global Rank: GX CNDDB Rank: SX | hairless popcornflower | |
| Plagiobothrys trachycarpus | CNPS-EB: C | rough-nutlet popcornflower, rough-fruited allocarya | |
| Platanus racemosa | CNPS-EB: C | western sycamore, California sycamore | |
| Prunus ilicifolia subsp. ilicifolia | CNPS-EB: B | islay, holly-leafed cherry | |
| Psilocarphus oregonus | CNPS-EB: A2 | Oregon woollyheads, Oregon woolly-marbles | |
| Puccinellia nuttalliana | CNPS-EB: A1 | Nuttall's alkali grass | |
| Quercus berberidifolia | CNPS-EB: C | scrub oak | |
| Rumex salicifolius | (formerly R. salicifolius var. salicifolius) | CNPS-EB: B | willow dock |
| Scutellaria californica | CNPS-EB: B | California skullcap | |
| Scutellaria tuberosa | CNPS-EB: C | Dannie's skullcap | |
| Selaginella bigelovii | CNPS-EB: B | spike-moss | |
| Senecio flaccidus var. douglasii | CNPS-EB: A2 | Douglas' threadleaf ragwort, shrubby butterweed | |
| Spergularia macrotheca var. leucantha | CNPS-EB: A2 | large-flowered sand spurry | |
| Stebbinsoseris heterocarpa | CNPS-EB: C | grassland silverpuffs, derived microseris | |
| Stipa cernua | CNPS-EB: C | nodding needlegrass | |
| Trifolium flavulum | (Included within T. fucatum in | CNPS-EB: A1 | bull clover |
| Trifolium gambelii | (Included within T. fucatum in | CNPS-EB: A1 | bull clover |
| Tropidocarpum capparideum | CNPS-EB: *A1 State CNPS: 1B.1 Global Rank: G1 CNDDB Rank: S1 | caper-fruited tropidocarpum | |
| Vicia hassei | CNPS-EB: A2 | slender vetch |